ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ms2A1 - ECOD Domain | ECOD

ECOD/Domains/e6ms2A1

e6ms2A1

UID: 002474168

PDB

Range: A:313-515
PDB: 6MS2 chain A(all domains)
UniProt: Q65MB6 (all domains)
Gene: xynB

Molecule: Glycoside Hydrolase Family 43

3D Structure

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Related Domains

Browse other domains in GH43_C2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGH43_C2(10.1.1.41)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17851GH43_C2

Beta xylosidase C-terminal Concanavalin A-like domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6MS2 RCSB PDB: 6MS2 PDBe: 6MS2 UniProt: Q65MB6

Downloads

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