ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6d5dA1 - ECOD Domain | ECOD

ECOD/Domains/e6d5dA1

e6d5dA1

UID: 002475160

PDB

Range: A:17-643
PDB: 6D5D chain A(all domains)
UniProt: A0A4V8GZQ9 (all domains)

Molecule: glycoside hydrolase WP_045175321

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_48 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_48(109.2.1.9)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02011Glyco_hydro_48

Glycosyl hydrolase family 48

ClanCL00596_Hairpin

External Links

ECOD PDB View: 6D5D RCSB PDB: 6D5D PDBe: 6D5D UniProt: A0A4V8GZQ9

Downloads

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