ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6n2aA2 - ECOD Domain | ECOD

ECOD/Domains/e6n2aA2

e6n2aA2

UID: 002475339

PDB

Range: A:50-301
PDB: 6N2A chain A(all domains)
UniProt: Q949X7 (all domains)
Gene: LYSA1

Molecule: Diaminopimelate decarboxylase 1, chloroplastic

3D Structure

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Related Domains

Browse other domains in Orn_Arg_deC_N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOrn_Arg_deC_N(2002.1.1.101)

Ligands

in contact, ≤ 4 Å

LysineLYS
drugDrugBank DB00123
Pyridoxal phosphatePLP
drugDrugBank DB00114

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF02784Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6N2A RCSB PDB: 6N2A PDBe: 6N2A UniProt: Q949X7

Downloads

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