ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q94C1 - ECOD Domain | ECOD

ECOD/Domains/e6q94C1

e6q94C1

UID: 002476560

PDB

Range: C:23-372
PDB: 6Q94 chain C(all domains)
UniProt: O60547 (all domains)
Gene: GMDS

Molecule: GDP-mannose 4,6 dehydratase

3D Structure

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Related Domains

Browse other domains in GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGDP_Man_Dehyd(2003.1.1.72)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSEGDD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6Q94 RCSB PDB: 6Q94 PDBe: 6Q94 UniProt: O60547

Downloads

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