ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6q94E1 - ECOD Domain | ECOD

ECOD/Domains/e6q94E1

e6q94E1

UID: 002476562

PDB

Range: E:23-372
PDB: 6Q94 chain E(all domains)
UniProt: O60547 (all domains)
Gene: GMDS

Molecule: GDP-mannose 4,6 dehydratase

3D Structure

Loading viewer...

Related Domains

Browse other domains in GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGDP_Man_Dehyd(2003.1.1.72)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSEGDD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6Q94 RCSB PDB: 6Q94 PDBe: 6Q94 UniProt: O60547

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure