ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gvaA1 - ECOD Domain | ECOD

ECOD/Domains/e6gvaA1

e6gvaA1

UID: 002476865

PDB

Range: A:1-290
PDB: 6GVA chain A(all domains)
UniProt: P24941 (all domains)
Gene: CDK2

Molecule: Cyclin-dependent kinase 2

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

MonothioglycerolSGM
drugDrugBank DB03864within 5 Å only
Bromide ionBR
Chloride ionCL

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 6GVA RCSB PDB: 6GVA PDBe: 6GVA UniProt: P24941

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

5-(2-azanylethylsulfanyl)-3-propan-2-yl-~{N}-[(4-pyridin-2-ylphenyl)methyl]-2~{H}-pyrazolo[4,3-d]pyrimidin-7-amineFCQ

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.