ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6c9vB1 - ECOD Domain | ECOD

ECOD/Domains/e6c9vB1

e6c9vB1

UID: 002477595

PDB

Range: B:2-324
PDB: 6C9V chain B(all domains)
UniProt: P9WID5 (all domains)
Gene: adoK

Molecule: Adenosine kinase

3D Structure

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Related Domains

Browse other domains in PfkB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyPfkB(2003.6.1.1)

Ligands

in contact, ≤ 4 Å

(2R,3S,4R,5R)-2-(hydroxymethyl)-5-[6-(4-phenylpiperazin-1-yl)-9H-purin-9-yl]tetrahydrofuran-3,4-diolERS
Sodium ionNA
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL

Pfam Families

pfkB family carbohydrate kinase

ClanCL0118Ribokinase

External Links

ECOD PDB View: 6C9V RCSB PDB: 6C9V PDBe: 6C9V UniProt: P9WID5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.