ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6j1oB1 - ECOD Domain | ECOD

ECOD/Domains/e6j1oB1

e6j1oB1

UID: 002477768

PDB

Range: B:130-387
PDB: 6J1O chain B(all domains)
UniProt: B8NJH3 (all domains)
Gene: lepI

Molecule: O-methyltransferase lepI

3D Structure

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Related Domains

Browse other domains in Methyltransf_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_2(2003.1.5.3)

Ligands

in contact, ≤ 4 Å

5'-S-methyl-5'-thioadenosineMTA
drugDrugBank DB02282
AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer.

Pfam Families

PF00891Methyltransf_2

O-methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6J1O RCSB PDB: 6J1O PDBe: 6J1O UniProt: B8NJH3

Downloads

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Drug annotations from DrugDomain.