ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6j24B1 - ECOD Domain | ECOD

ECOD/Domains/e6j24B1

e6j24B1

UID: 002477770

PDB

Range: B:130-387
PDB: 6J24 chain B(all domains)
UniProt: B8NJH3 (all domains)
Gene: lepI

Molecule: O-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_2(2003.1.5.3)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
(3~{S},4'~{R},4'~{a}~{S},6'~{R},8'~{a}~{S})-4',6'-dimethyl-5-phenyl-spiro[1~{H}-pyridine-3,5'-2,3,4,4~{a},6,8~{a}-hexahydro-1~{H}-naphthalene]-2,4-dioneBYO

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00891Methyltransf_2

O-methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6J24 RCSB PDB: 6J24 PDBe: 6J24 UniProt: B8NJH3

Downloads

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