ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p5jA1 - ECOD Domain | ECOD

ECOD/Domains/e1p5jA1

e1p5jA1

UID: 002482193

RepresentativePDB

Range: A:4-142
PDB: 1P5J chain A(all domains)
UniProt: P20132 (all domains)
Gene: SDS

Molecule: L-serine dehydratase

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1P5J RCSB PDB: 1P5J PDBe: 1P5J UniProt: P20132

Downloads

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