ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cooB3 - ECOD Domain | ECOD

ECOD/Domains/e4cooB3

e4cooB3

UID: 002482610

PDB

Range: B:43-231
PDB: 4COO chain B(all domains)
UniProt: P35520 (all domains)
Gene: CBS

Molecule: CYSTATHIONINE BETA-SYNTHASE

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Pyridoxal phosphatePLP
drugDrugBank DB00114
Sodium ion

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4COO RCSB PDB: 4COO PDBe: 4COO UniProt: P35520

Downloads

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metal

+ 2 additives (Acetate ion, 1,2-ETHANEDIOL)

Acetate ionACT
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.