ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d9bB1 - ECOD Domain | ECOD

ECOD/Domains/e4d9bB1

e4d9bB1

UID: 002482700

PDB

Range: B:167-328
PDB: 4D9B chain B(all domains)
UniProt: Q8ZNT7 (all domains)
Gene: dcyD

Molecule: D-cysteine desulfhydrase

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxamine-5'-PhosphatePMP
drugDrugBank DB02142
BenzamidineBEN

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOL

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4D9B RCSB PDB: 4D9B PDBe: 4D9B UniProt: Q8ZNT7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.