ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d9fC2 - ECOD Domain | ECOD

ECOD/Domains/e4d9fC2

e4d9fC2

UID: 002482727

PDB

Range: C:167-328
PDB: 4D9F chain C(all domains)
UniProt: Q8ZNT7 (all domains)
Gene: dcyD

Molecule: D-Cysteine desulfhydrase

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

D-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-N,O-cycloserylamideDCS
drugDrugBank DB02038
BenzamidineBEN
within 5 Å only

Shown in the structure viewer.

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4D9F RCSB PDB: 4D9F PDBe: 4D9F UniProt: Q8ZNT7

Downloads

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Drug annotations from DrugDomain.