ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1k8yB2 - ECOD Domain | ECOD

ECOD/Domains/e1k8yB2

e1k8yB2

UID: 002483170

PDB

Range: B:201-391
PDB: 1K8Y chain B(all domains)
UniProt: P0A2K1 (all domains)
Gene: trpB

Molecule: TRYPTOPHAN SYNTHASE BETA CHAIN

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1K8Y RCSB PDB: 1K8Y PDBe: 1K8Y UniProt: P0A2K1

Downloads

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