ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2x7jC4 - ECOD Domain | ECOD

ECOD/Domains/e2x7jC4

e2x7jC4

UID: 002483733

PDB

Range: C:200-370
PDB: 2X7J chain C(all domains)
UniProt: P23970 (all domains)
Gene: menD

Molecule: 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE -1-CARBOXYLATE SYNTHASE

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_M_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilyTPP_enzyme_M_2(2003.1.4.10)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16582TPP_enzyme_M_2

Middle domain of thiamine pyrophosphate

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2X7J RCSB PDB: 2X7J PDBe: 2X7J UniProt: P23970

Downloads

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