ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d85A2 - ECOD Domain | ECOD

ECOD/Domains/e5d85A2

e5d85A2

UID: 002483908

PDB

Range: A:161-321
PDB: 5D85 chain A(all domains)
UniProt: A6QDA0 (all domains)
Gene: sbnA

Molecule: Probable siderophore biosynthesis protein SbnA

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACIDP1T

+ 2 additives (Glycerin, Citrate anion)

GlycerinGOL
DrugBank DB09462
Citrate anion

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5D85 RCSB PDB: 5D85 PDBe: 5D85 UniProt: A6QDA0

Downloads

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