ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6okhB1 - ECOD Domain | ECOD

ECOD/Domains/e6okhB1

e6okhB1

UID: 002485377

PDB

Range: B:5-180
PDB: 6OKH chain B(all domains)
UniProt: Q04QG8 (all domains)
Gene: LBJ_2390

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Uma2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyUma2(2008.1.1.20)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Putative restriction endonuclease

ClanCL0236PDDEXK

External Links

ECOD PDB View: 6OKH RCSB PDB: 6OKH PDBe: 6OKH UniProt: Q04QG8

Downloads

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