ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6c48B1 - ECOD Domain | ECOD

ECOD/Domains/e6c48B1

e6c48B1

UID: 002485670

RepresentativePDB

Range: B:63-116
PDB: 6C48 chain B(all domains)
UniProt: Q52LA3 (all domains)
Gene: LIN52

Molecule: Protein lin-52 homolog

3D Structure

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Related Domains

Browse other domains in LIN52 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLIN9-LIN52 heterodimer(7025)

HH-groupLIN9-LIN52 heterodimer(7025.1)

TT-groupLIN9-LIN52 heterodimer(7025.1.1)

FFamilyLIN52(7025.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Retinal tissue protein

External Links

ECOD PDB View: 6C48 RCSB PDB: 6C48 PDBe: 6C48 UniProt: Q52LA3

Downloads

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