ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ms4B1 - ECOD Domain | ECOD

ECOD/Domains/e6ms4B1

e6ms4B1

UID: 002485704

RepresentativePDB

Range: B:25-70
PDB: 6MS4 chain B(all domains)
UniProt: O43583 (all domains)
Gene: DENR

Molecule: Density-regulated protein

3D Structure

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Related Domains

Browse other domains in DENR_N →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupZinc-binding domain of DENR(7038)

HH-groupZinc-binding domain of DENR(7038.1)

TT-groupZinc-binding domain of DENR(7038.1.1)

FFamilyDENR_N(7038.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Glycerin, Triethylene glycol)

GlycerinGOL
DrugBank DB09462
Triethylene glycol

Pfam Families

DENR, N-terminal

External Links

ECOD PDB View: 6MS4 RCSB PDB: 6MS4 PDBe: 6MS4 UniProt: O43583

Downloads

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DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.