ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2bytD1 - ECOD Domain | ECOD

ECOD/Domains/e2bytD1

e2bytD1

UID: 002485972

PDB

Range: D:418-497
PDB: 2BYT chain D(all domains)
UniProt: Q7SIE4 (all domains)
Gene: leuS

Molecule: LEUCYL-TRNA SYNTHETASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilytRNA-synt_1(375.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
MERCURY (II) IONHG
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

External Links

ECOD PDB View: 2BYT RCSB PDB: 2BYT PDBe: 2BYT UniProt: Q7SIE4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.