ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4m58A1 - ECOD Domain | ECOD

ECOD/Domains/e4m58A1

e4m58A1

UID: 002486107

RepresentativePDB

Range: A:1-227
PDB: 4M58 chain A(all domains)
UniProt: Q8R9C0 (all domains)
Gene: CbiM2

Molecule: Cobalamin biosynthesis protein CbiM

3D Structure

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Related Domains

Browse other domains in CbiM →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupS-component of energy-coupling factor (ECF) transporters(604.39)

TT-groupS-component of energy-coupling factor (ECF) transporters(604.39.1)

FFamilyCbiM(604.39.1.1)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Cobalt uptake substrate-specific transmembrane region

ClanCL0315Gx_transp

External Links

ECOD PDB View: 4M58 RCSB PDB: 4M58 PDBe: 4M58 UniProt: Q8R9C0

Downloads

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