ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a9kA2 - ECOD Domain | ECOD

ECOD/Domains/e5a9kA2

e5a9kA2

UID: 002486402

PDB

Range: A:376-579
PDB: 5A9K chain A(all domains)
UniProt: P03116 (all domains)
Gene: E1

Molecule: REPLICATION PROTEIN E1

3D Structure

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Related Domains

Browse other domains in PPV_E1_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupN-terminal domain of large tumor antigen(8001)

HH-groupN-terminal domain of large tumor antigen(8001.1)

TT-groupN-terminal domain of large tumor antigen(8001.1.1)

FFamilyPPV_E1_C(8001.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00519PPV_E1_C

Papillomavirus helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5A9K RCSB PDB: 5A9K PDBe: 5A9K UniProt: P03116

Downloads

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