ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xetC2 - ECOD Domain | ECOD

ECOD/Domains/e5xetC2

e5xetC2

UID: 002486890

PDB

Range: C:348-508
PDB: 5XET chain C(all domains)
UniProt: A5U150 (all domains)
Gene: metG

Molecule: Methionine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in Anticodon_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilyAnticodon_3(140.1.1.9)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF19303Anticodon_3

Anticodon binding domain of methionyl tRNA ligase

ClanCL0258DALR

External Links

ECOD PDB View: 5XET RCSB PDB: 5XET PDBe: 5XET UniProt: A5U150

Downloads

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