ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ivsA2 - ECOD Domain | ECOD

ECOD/Domains/e1ivsA2

e1ivsA2

UID: 002488196

RepresentativePDB

Range: A:521-711
PDB: 1IVS chain A(all domains)
UniProt: P96142 (all domains)
Gene: valS

Molecule: Valyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in Anticodon_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilyAnticodon_1(140.1.1.5)

Ligands

in contact, ≤ 4 Å

N-[VALINYL]-N'-[ADENOSYL]-DIAMINOSUFONEVAA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08264Anticodon_1

Anticodon-binding domain of tRNA ligase

ClanCL0258DALR

External Links

ECOD PDB View: 1IVS RCSB PDB: 1IVS PDBe: 1IVS UniProt: P96142

Downloads

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