ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1li5A2 - ECOD Domain | ECOD

ECOD/Domains/e1li5A2

e1li5A2

UID: 002488203

RepresentativePDB

Range: A:1-132,A:205-258
PDB: 1LI5 chain A(all domains)
UniProt: P21888 (all domains)
Gene: cysS

Molecule: CYSTEINYL-TRNA SYNTHETASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1e →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1e(2005.1.1.12)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01406tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

ClanCL0039HUP

External Links

ECOD PDB View: 1LI5 RCSB PDB: 1LI5 PDBe: 1LI5 UniProt: P21888

Downloads

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