ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2d5bA1 - ECOD Domain | ECOD

ECOD/Domains/e2d5bA1

e2d5bA1

UID: 002488218

RepresentativePDB

Range: A:116-226
PDB: 2D5B chain A(all domains)
UniProt: P23395 (all domains)
Gene: metG

Molecule: Methionyl-tRNA Synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1g →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilytRNA-synt_1g(375.1.1.46)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

ECOD PDB View: 2D5B RCSB PDB: 2D5B PDBe: 2D5B UniProt: P23395

Downloads

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