ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c8zA3 - ECOD Domain | ECOD

ECOD/Domains/e3c8zA3

e3c8zA3

UID: 002488605

PDB

Range: A:148-226
PDB: 3C8Z chain A(all domains)
UniProt: A0QZY0 (all domains)
Gene: mshC

Molecule: Cysteinyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilytRNA-synt_1e(375.1.1.10)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Pentaethylene glycol, Sulfate ion)

Pentaethylene glycol1PE
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01406tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

ClanCL0039HUP

External Links

ECOD PDB View: 3C8Z RCSB PDB: 3C8Z PDBe: 3C8Z UniProt: A0QZY0

Downloads

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