ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4eg3A1 - ECOD Domain | ECOD

ECOD/Domains/e4eg3A1

e4eg3A1

UID: 002488737

PDB

Range: A:239-602
PDB: 4EG3 chain A(all domains)
UniProt: Q38C91 (all domains)
Gene: Tb10.70.6470

Molecule: Methionyl-tRNA synthetase, putative

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1+tRNA-synt_1g →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1+tRNA-synt_1g(2005.1.1.40)

Ligands

in contact, ≤ 4 Å

[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl](2S)-2-azanyl-4-methylsulfanyl-butanoateME8

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

ECOD PDB View: 4EG3 RCSB PDB: 4EG3 PDBe: 4EG3 UniProt: Q38C91

Downloads

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