ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1exdA7 - ECOD Domain | ECOD

ECOD/Domains/e1exdA7

e1exdA7

UID: 002488779

PDB

Range: A:261-344
PDB: 1EXD chain A(all domains)
UniProt: P00962 (all domains)
Gene: glnS

Molecule: GLUTAMINYL-TRNA SYNTHETASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1c →

Classification

AArchitecturealpha bundles(a.7)

XX-groupZn-binding domain in glutaminyl-tRNA synthetase(8002)

HH-groupZn-binding domain in glutaminyl-tRNA synthetase(8002.1)

TT-groupZn-binding domain in glutaminyl-tRNA synthetase(8002.1.1)

FFamilytRNA-synt_1c(8002.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00749tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

ClanCL0039HUP

External Links

ECOD PDB View: 1EXD RCSB PDB: 1EXD PDBe: 1EXD UniProt: P00962

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.