ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1o0bA4 - ECOD Domain | ECOD

ECOD/Domains/e1o0bA4

e1o0bA4

UID: 002489113

PDB

Range: A:8-116,A:207-260
PDB: 1O0B chain A(all domains)
UniProt: P00962 (all domains)
Gene: glnS

Molecule: Glutaminyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1c →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1c(2005.1.1.5)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
L-GlutamineGLN
drugDrugBank DB00130

+ 1 additive (Sulfate ion)

Pfam Families

PF00749tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

ClanCL0039HUP

External Links

ECOD PDB View: 1O0B RCSB PDB: 1O0B PDBe: 1O0B UniProt: P00962

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.