ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2x1lA1 - ECOD Domain | ECOD

ECOD/Domains/e2x1lA1

e2x1lA1

UID: 002489413

PDB

Range: A:2-349
PDB: 2X1L chain A(all domains)
UniProt: A0R3E2 (all domains)
Gene: metG

Molecule: METHIONYL-TRNA SYNTHETASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1, tRNA-synt_1e, tRNA-synt_1g →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1, tRNA-synt_1e, tRNA-synt_1g(2005.1.1.55)

Ligands

in contact, ≤ 4 Å

Dihydrogenphosphate2HP
drugDrugBank DB02831
AdenosineADN
drugDrugBank DB00640
3-(cyclohexylamino)propanesulfonic acid

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

PF01406tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

ClanCL0039HUP

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

ECOD PDB View: 2X1L RCSB PDB: 2X1L PDBe: 2X1L UniProt: A0R3E2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB02219

MethionineMET

drugDrugBank DB00134

Shown in the structure viewer. Drug annotations from DrugDomain.