ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zgzA8 - ECOD Domain | ECOD

ECOD/Domains/e3zgzA8

e3zgzA8

UID: 002489448

PDB

Range: A:1-148,A:490-568
PDB: 3ZGZ chain A(all domains)
UniProt: P07813 (all domains)
Gene: leuS

Molecule: LEUCINE--TRNA LIGASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1(2005.1.1.1)

Ligands

in contact, ≤ 4 Å

[(2S,4S,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-2-yl]methoxy-N-[(2S,3R)-4-methyl-2,3-bis(oxidanyl)pentanoyl]phosphonamidic acid84T

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

External Links

ECOD PDB View: 3ZGZ RCSB PDB: 3ZGZ PDBe: 3ZGZ UniProt: P07813

Downloads

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