ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ah5B8 - ECOD Domain | ECOD

ECOD/Domains/e5ah5B8

e5ah5B8

UID: 002489580

PDB

Range: B:563-749
PDB: 5AH5 chain B(all domains)
UniProt: B9JQP8 (all domains)
Gene: agnB2

Molecule: LEUCINE--TRNA LIGASE

3D Structure

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Related Domains

Browse other domains in Anticodon_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilyAnticodon_1(140.1.1.5)

Ligands

in contact, ≤ 4 Å

5'-O-(L-leucylsulfamoyl)adenosineLSS

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08264Anticodon_1

Anticodon-binding domain of tRNA ligase

ClanCL0258DALR

External Links

ECOD PDB View: 5AH5 RCSB PDB: 5AH5 PDBe: 5AH5 UniProt: B9JQP8

Downloads

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