ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jysD1 - ECOD Domain | ECOD

ECOD/Domains/e6jysD1

e6jysD1

UID: 002490358

PDB

Range: D:3-310
PDB: 6JYS chain D(all domains)
UniProt: A0A509GV48 (all domains)

Molecule: human norovirus P protein

3D Structure

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Related Domains

Browse other domains in Calicivirus coat protein / Calicivirus coat protein C-terminal →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalicivirus coat protein / Calicivirus coat protein C-terminal(10.2.1.14)

Ligands

in contact, ≤ 4 Å

ThreonineTHR
drugDrugBank DB00156within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6JYS RCSB PDB: 6JYS PDBe: 6JYS UniProt: A0A509GV48

Downloads

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