ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yjeB2 - ECOD Domain | ECOD

ECOD/Domains/e5yjeB2

e5yjeB2

UID: 002491390

RepresentativePDB

Range: B:860-871,B:883-894,B:900-964,B:973-1016
PDB: 5YJE chain B(all domains)
UniProt: P54198 (all domains)
Gene: HIRA

Molecule: Protein HIRA

3D Structure

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Related Domains

Browse other domains in Hira →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupDNA polymerase alpha-binding protein Ctf4 C-terminal domain(109.40)

TT-groupDNA polymerase alpha-binding protein Ctf4 C-terminal domain(109.40.1)

FFamilyHira(109.40.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TUP1-like enhancer of split

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5YJE RCSB PDB: 5YJE PDBe: 5YJE UniProt: P54198

Downloads

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