ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jdpA1 - ECOD Domain | ECOD

ECOD/Domains/e6jdpA1

e6jdpA1

UID: 002491894

PDB

Range: A:28-239
PDB: 6JDP chain A(all domains)
UniProt: Q9HXA5 (all domains)
Gene: PA3908

Molecule: Imm52 family protein

3D Structure

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Related Domains

Browse other domains in Imm52 →

Classification

AArchitecturea+b two layers(a.11)

XX-grouphypothetical protein BPSL2088(3925)

HH-grouphypothetical protein BPSL2088(3925.1)

TT-grouphypothetical protein BPSL2088(3925.1.1)

FFamilyImm52(3925.1.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunity protein 52

ClanCL0961TsiV_TsiT-like

External Links

ECOD PDB View: 6JDP RCSB PDB: 6JDP PDBe: 6JDP UniProt: Q9HXA5

Downloads

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