ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gzvA1 - ECOD Domain | ECOD

ECOD/Domains/e6gzvA1

e6gzvA1

UID: 002494196

PDB

Range: A:13-281
PDB: 6GZV chain A(all domains)
UniProt: P03313 (all domains)

Molecule: Capsid protein VP1

3D Structure

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Related Domains

Browse other domains in Rhv_5 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv_5(10.2.1.69)

Ligands

in contact, ≤ 4 Å

4-[[4-[1,3-bis(oxidanylidene)isoindol-2-yl]phenyl]sulfonylamino]benzoic acidFHK

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Picornavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6GZV RCSB PDB: 6GZV PDBe: 6GZV UniProt: P03313

Downloads

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