ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6q89A6 - ECOD Domain | ECOD

ECOD/Domains/e6q89A6

e6q89A6

UID: 002495232

PDB

Range: A:428-504
PDB: 6Q89 chain A(all domains)
UniProt: A0A5K1KQ39 (all domains)

Molecule: Leucine--tRNA ligase

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA-synt_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilytRNA-synt_1(375.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

External Links

ECOD PDB View: 6Q89 RCSB PDB: 6Q89 PDBe: 6Q89 UniProt: A0A5K1KQ39

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure