ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nusA1 - ECOD Domain | ECOD

ECOD/Domains/e6nusA1

e6nusA1

UID: 002495320

PDB

Range: A:118-426,A:456-919
PDB: 6NUS chain A(all domains)
UniProt: P0C6X7 (all domains)
Gene: rep

Molecule: NSP12

3D Structure

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Related Domains

Browse other domains in RdRP_1,CoV_RPol_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1,CoV_RPol_N(304.48.1.9)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

PF06478CoV_RPol_N

Coronavirus RNA-dependent RNA polymerase, N-terminal

External Links

ECOD PDB View: 6NUS RCSB PDB: 6NUS PDBe: 6NUS UniProt: P0C6X7

Downloads

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