ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nzkC1 - ECOD Domain | ECOD

ECOD/Domains/e6nzkC1

e6nzkC1

UID: 002495336

PDB

Range: C:784-1234
PDB: 6NZK chain C(all domains)
UniProt: Q696P8 (all domains)
Gene: S

Molecule: Spike surface glycoprotein

3D Structure

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Related Domains

Browse other domains in CoV_S2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupS2 subunit of coronavirus spike glycoprotein(1042)

HH-groupS2 subunit of coronavirus spike glycoprotein(1042.1)

TT-groupS2 subunit of coronavirus spike glycoprotein(1042.1.1)

FFamilyCoV_S2(1042.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Coronavirus spike glycoprotein S2

ClanCL0595Fusion_gly

External Links

ECOD PDB View: 6NZK RCSB PDB: 6NZK PDBe: 6NZK UniProt: Q696P8

Downloads

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