ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6mb1A1 - ECOD Domain | ECOD

ECOD/Domains/e6mb1A1

e6mb1A1

UID: 002496505

PDB

Range: A:211-410
PDB: 6MB1 chain A(all domains)
UniProt: A0A1G4HIY1 (all domains)
Gene: PVC01_130042700

Molecule: Glycylpeptide N-tetradecanoyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in NMT_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyNMT_C(213.1.1.9)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
1-(5-{4-fluoro-2-[2-(1,3,5-trimethyl-1H-pyrazol-4-yl)ethoxy]phenyl}-1-methyl-1H-indazol-3-yl)-N,N-dimethylmethanamineJCY
TETRADEC-13-YNOIC ACID - COA THIOESTERYNC

Pfam Families

Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 6MB1 RCSB PDB: 6MB1 PDBe: 6MB1 UniProt: A0A1G4HIY1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.