ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mb1C2 - ECOD Domain | ECOD

ECOD/Domains/e6mb1C2

e6mb1C2

UID: 002496510

PDB

Range: C:211-410
PDB: 6MB1 chain C(all domains)
UniProt: A0A1G4HIY1 (all domains)
Gene: PVC01_130042700

Molecule: Glycylpeptide N-tetradecanoyltransferase

3D Structure

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Related Domains

Browse other domains in NMT_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyNMT_C(213.1.1.9)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
1-(5-{4-fluoro-2-[2-(1,3,5-trimethyl-1H-pyrazol-4-yl)ethoxy]phenyl}-1-methyl-1H-indazol-3-yl)-N,N-dimethylmethanamineJCY
TETRADEC-13-YNOIC ACID - COA THIOESTERYNC

Pfam Families

Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 6MB1 RCSB PDB: 6MB1 PDBe: 6MB1 UniProt: A0A1G4HIY1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.