ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6qlvE1 - ECOD Domain | ECOD

ECOD/Domains/e6qlvE1

e6qlvE1

UID: 002496719

PDB

Range: E:2-194
PDB: 6QLV chain E(all domains)
UniProt: A0A072ZCW8 (all domains)
Gene: ubiX

Molecule: Flavin prenyltransferase UbiX

3D Structure

Loading viewer...

Related Domains

Browse other domains in Flavoprotein →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHomo-oligomeric flavin-containing Cys decarboxylases, HFCD(7564)

HH-groupHomo-oligomeric flavin-containing Cys decarboxylases, HFCD(7564.1)

TT-groupHomo-oligomeric flavin-containing Cys decarboxylases, HFCD(7564.1.1)

FFamilyFlavoprotein(7564.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
[(2~{R},3~{S},4~{S})-5-[5-[(2~{Z})-3,7-dimethylocta-2,6-dienyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphateHJN

Pfam Families

PF02441Flavoprotein

Flavoprotein

External Links

ECOD PDB View: 6QLV RCSB PDB: 6QLV PDBe: 6QLV UniProt: A0A072ZCW8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

[(2~{Z})-3,7-dimethylocta-2,6-dienyl] dihydrogen phosphate

Sodium ionNA

metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.