ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6itcA2 - ECOD Domain | ECOD

ECOD/Domains/e6itcA2

e6itcA2

UID: 002496805

PDB

Range: A:14-223,A:349-395
PDB: 6ITC chain A(all domains)
UniProt: P28366 (all domains)
Gene: secA

Molecule: Protein translocase subunit SecA

3D Structure

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Related Domains

Browse other domains in SecA_DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySecA_DEAD(2004.1.1.149)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Beryllium trifluoride ionBEF
Magnesium ionMG

Pfam Families

PF07517SecA_DEAD

SecA DEAD-like domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6ITC RCSB PDB: 6ITC PDBe: 6ITC UniProt: P28366

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.