ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bk9A1 - ECOD Domain | ECOD

ECOD/Domains/e5bk9A1

e5bk9A1

UID: 002499440

PDB

Range: A:7-295
PDB: 5BK9 chain A(all domains)
UniProt: P83310 (all domains)
Gene: rdpA

Molecule: (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase

3D Structure

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Related Domains

Browse other domains in TauD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyTauD(10.12.1.12)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139
oxovanadium(2+)VVO

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

Taurine catabolism dioxygenase TauD, TfdA family

ClanCL0029Cupin

External Links

ECOD PDB View: 5BK9 RCSB PDB: 5BK9 PDBe: 5BK9 UniProt: P83310

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.