ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6a1eA1 - ECOD Domain | ECOD

ECOD/Domains/e6a1eA1

e6a1eA1

UID: 002500449

PDB

Range: A:232-564
PDB: 6A1E chain A(all domains)
UniProt: A0A0A0RDR2 (all domains)

Molecule: Sesquisabinene B synthase 1

3D Structure

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Related Domains

Browse other domains in Terpene_synth_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTerpene_synth_C(141.1.1.4)

Ligands

in contact, ≤ 4 Å

Farnesyl thiopyrophosphateFPS
drugDrugBank DB04695

+ 4 additives (Carbonate ion, Glycerin, Sulfate ion, …)

Carbonate ionCO3
DrugBank DB14531

Pfam Families

PF03936Terpene_synth_C

Terpene synthase family, metal binding domain

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 6A1E RCSB PDB: 6A1E PDBe: 6A1E UniProt: A0A0A0RDR2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

TromethamineTRS

DrugBank DB03754within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.