ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6a1eA2 - ECOD Domain | ECOD

ECOD/Domains/e6a1eA2

e6a1eA2

UID: 002500450

PDB

Range: A:34-231
PDB: 6A1E chain A(all domains)
UniProt: A0A0A0RDR2 (all domains)

Molecule: Sesquisabinene B synthase 1

3D Structure

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Related Domains

Browse other domains in Terpene_synth →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyTerpene_synth(109.2.1.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Carbonate ion, Glycerin, Tromethamine, …)

Carbonate ionCO3
DrugBank DB14531
GlycerinGOL
DrugBank DB09462
Tromethamine

Pfam Families

PF01397Terpene_synth

Terpene synthase, N-terminal domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 6A1E RCSB PDB: 6A1E PDBe: 6A1E UniProt: A0A0A0RDR2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.