ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fgaA1 - ECOD Domain | ECOD

ECOD/Domains/e6fgaA1

e6fgaA1

UID: 002500624

PDB

Range: A:7-82
PDB: 6FGA chain A(all domains)
UniProt: P19474 (all domains)
Gene: TRIM21

Molecule: E3 ubiquitin-protein ligase TRIM21

3D Structure

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Related Domains

Browse other domains in zf-C3HC4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4(376.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00097zf-C3HC4

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

ECOD PDB View: 6FGA RCSB PDB: 6FGA PDBe: 6FGA UniProt: P19474

Downloads

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