ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6j39B2 - ECOD Domain | ECOD

ECOD/Domains/e6j39B2

e6j39B2

UID: 002500784

PDB

Range: B:221-312
PDB: 6J39 chain B(all domains)
UniProt: X5IYZ1 (all domains)
Gene: cmiS2

Molecule: FAD-dependent glycine oxydase

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD-linked reductases-C(244.1)

TT-groupFAD-linked reductases-C(244.1.1)

FFamilyDAO(244.1.1.4)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
(3R)-3-[(carboxymethyl)sulfanyl]nonanoic acidB6X

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6J39 RCSB PDB: 6J39 PDBe: 6J39 UniProt: X5IYZ1

Downloads

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