ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6k5kD1 - ECOD Domain | ECOD

ECOD/Domains/e6k5kD1

e6k5kD1

UID: 002500868

PDB

Range: D:9-295
PDB: 6K5K chain D(all domains)
UniProt: A0A410UCT3 (all domains)
Gene: up

Molecule: Uridine phosphorylase

3D Structure

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Related Domains

Browse other domains in PNP_UDP_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupPeptidyl-tRNA hydrolase-like(2011.2)

TT-groupPeptidyl-tRNA hydrolase-like(2011.2.1)

FFamilyPNP_UDP_1(2011.2.1.1)

Ligands

in contact, ≤ 4 Å

2'-DeoxyuridineDUR
drugDrugBank DB02256

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF01048PNP_UDP_1

Phosphorylase superfamily

ClanCL0408PUP

External Links

ECOD PDB View: 6K5K RCSB PDB: 6K5K PDBe: 6K5K UniProt: A0A410UCT3

Downloads

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Drug annotations from DrugDomain.